BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006D03SP1|AL425519
(1006 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1691 1221 0.0
>3x_Contig1691
Length = 15574
Score = 1221 bits (607), Expect = 0.0
Identities = 643/655 (98%), Gaps = 3/655 (0%)
Strand = Plus / Minus
Query: 1 tggatcacaaatgagagatagaagtagaagtgattgggaaattggaatgatcgawaactc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 6954 tggatcacaaatgagagatagaagtagaagtgattgggaaattggaatgatcgaaaactc 6895
Query: 61 aagacacttcaaatatgcagacgtaattccaagtttttacctagatcatgtaaagaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6894 aagacacttcaaatatgcagacgtaattccaagtttttacctagatcatgtaaagaaaag 6835
Query: 121 tacagccaactattgagcacagaaaaaaaaaaaaaagaacctcgaactgctgactttaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6834 tacagccaactattgagcacagaaaaaaaaaaaaaagaacctcgaactgctgactttaca 6775
Query: 181 ctcatcgtaaagtcaggtaaaaatttcctaacgggcagcttttctatttatatttgtatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6774 ctcatcgtaaagtcaggtaaaaatttcctaacgggcagcttttctatttatatttgtatt 6715
Query: 241 taaataatatttgtttcttaattaccggatcttgcacaccatctgcgtacgawatatgca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 6714 taaataatatttgtttcttaattaccggatcttgcacaccatctgcgtacgatatatgca 6655
Query: 301 gcctttaaaatttatcaaatttacgcggactgtggactaaattgtggataaggactttag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6654 gcctttaaaatttatcaaatttacgcggactgtggactaaattgtggataaggactttag 6595
Query: 361 atagacaaaaagacgataaacgtatattatagataatgtgtggtaatgtttatgtagttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6594 atagacaaaaagacgataaacgtatattatagataatgtgtggtaatgtttatgtagttt 6535
Query: 421 tgcggtactttgcagggacagttaaaggacgcacctttcaatctttatatatttgttttt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 6534 tgcggtactttgcagggacagttaaaggacgcacctttcaatctttatatatctgtcttt 6475
Query: 481 ttgaatataaccgaaag-aatgcaatcaatactgtaagatatagaa-gagtgctcaaaaa 538
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6474 ctgaatataaccgaaagcaatgcaatcaatactgtaagatatagaaggagtgctcaaaaa 6415
Query: 539 agagatcgaagcctgactgatagacgcataamamacattctgtttggtaacactaacggt 598
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 6414 agagatcgaagcctgactgatagacgcataaaaaacattctgtttggtaacactaacggt 6355
Query: 599 acgaatgctttccagaataaatttg-tgcactttgtattccassatttaatcaac 652
||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 6354 acgaatgctttccagaataaatttgctgcactttgtattccaggatttaatcaac 6300
Score = 485 bits (241), Expect = e-137
Identities = 256/259 (98%), Gaps = 2/259 (0%)
Strand = Plus / Minus
Query: 750 tctctcttacctctggtgtttctgtcagctcttggctttggcaaagagtcagagaaagtg 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6202 tctctcttacctctggtgtttctgtcagctcttggctttggcaaagagtcagagaaagtg 6143
Query: 810 acatcgaagtccaaaaattgcttagtcttcaattgcttagacttgaccttcttgaccttg 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6142 acatcgaagtccaaaaattgcttagtcttcaattgcttagacttgaccttcttgaccttg 6083
Query: 870 gtagctggagcgaagacatcagcttccttagcttccaattgagtaccatcgaattcgact 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6082 gtagctggagcgaagacatcagcttccttagcttccaattgagtaccatcgaattcgact 6023
Query: 930 tccttcttggcagctggagcgtccaaggagctgttagcctttagttc-tccaagtatt-c 987
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 6022 tccttcttggcagctggagcgtccaaggagctgttagcctttagttcttccaagtattcc 5963
Query: 988 ytcaaggacttcttgttgt 1006
||||||||||||||||||
Sbjct: 5962 ttcaaggacttcttgttgt 5944
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,663
Number of Sequences: 1807
Number of extensions: 15663
Number of successful extensions: 374
Number of sequences better than 1.0e-20: 1
length of query: 1006
length of database: 10,358,551
effective HSP length: 16
effective length of query: 990
effective length of database: 10,329,639
effective search space: 10226342610
effective search space used: 10226342610
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)